STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_4348Putative uncharacterized HDOD domain protein. (281 aa)    
Predicted Functional Partners:
MVIS_1785
Putative metal dependent phosphohydrolase.
  
 
   0.567
MVIS_4043
Putative chemotaxis protein.
 
     0.528
flhF
Flagellar biosynthesis protein FlhF.
 
     0.497
MVIS_3121
Putative exported protein.
  
 
   0.491
flgK-2
Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family.
 
    0.490
flgI-2
Flagellar P-ring protein 2 precursor (basal body P-ring protein 2); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.485
MVIS_0825
Chemotaxis protein CheV.
 
 
   0.458
MVIS_4347
Putative uncharacterized protein.
       0.455
flgI
Flagellar P-ring protein 2 precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.452
flgH-2
Flagellar L-ring protein 1 precursor (basal body L-ring protein 1); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.445
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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