STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_4362Putative uncharacterized protein. (78 aa)    
Predicted Functional Partners:
MVIS_0026
Putative uncharacterized protein, SCP-2 sterol transfer family.
  
   
 0.747
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
     0.681
smg
Protein smg homolog; Belongs to the Smg family.
  
     0.650
MVIS_0671
Putative uncharacterized protein.
  
     0.622
MVIS_0846
UPF0149 protein; Belongs to the UPF0149 family.
  
    0.599
MVIS_4227
Membrane protein.
  
     0.599
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
     0.593
rdgC
Recombination associated protein RdgC; May be involved in recombination; Belongs to the RdgC family.
  
     0.560
MVIS_0662
Putative uncharacterized SAM-dependent methyltransferase.
  
     0.551
MVIS_4361
Putative exported protein.
       0.548
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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