Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
MVIS_4384Recombinase. (613 aa)    
Predicted Functional Partners:
MVIS_4385
Putative competence protein.
       0.567
MVIS_4387
Phospholipid/glycerol acyltransferase.
 
     0.494
MVIS_4386
Phospholipid/glycerol acyltransferase.
 
     0.492
MVIS_4382
Putative mobilisation protein MobC.
     
 0.454
MVIS_4383
Putative mobilisation protein MobC.
       0.422
MVIS_1255
Terminase, ATPase subunit.
   
    0.405
MVIS_3230
Bacteriophage Mu-like gp31 protein.
   
    0.400
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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