Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_4385Putative competence protein. (279 aa)    
Predicted Functional Partners:
MVIS_4375
Putative uncharacterized protein.
 
     0.976
smf
Smf protein.
 
 0.914
MVIS_4267
Putative uncharacterized protein, phosphoribosyl transferase domain.
 
  
 0.876
MVIS_4196
UPF0102 protein; Belongs to the UPF0102 family.
 
  
 0.733
MVIS_2325
Putative competence protein.
 
  
 0.716
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
     0.715
MVIS_4386
Phospholipid/glycerol acyltransferase.
  
    0.600
MVIS_4387
Phospholipid/glycerol acyltransferase.
  
    0.600
MVIS_4384
Recombinase.
       0.567
MVIS_2030
Response regulator.
  
    0.534
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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