STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_4429Amino acid ABC transporter, permease protein. (199 aa)    
Predicted Functional Partners:
MVIS_4428
Amino acid ABC transporter, substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.999
MVIS_4430
Amino acid ABC transporter, ATP-binding protein.
 0.999
MVIS_3291
Amino acid ABC transporter, ATP-binding protein.
 
 0.995
artI
Arginine ABC transporter, periplasmic substrate-binding protein.
 
 0.984
MVIS_3293
Amino acid ABC transporter, inner membrane component.
 
0.969
artP
Arginine ABC transporter, ATP-binding protein.
 
     0.959
aotP
Arginine/ornithine periplasmic binding protein-dependent transporter, ATP-binding component.
    0.955
aotJ
Arginine/ornithine periplasmic binding protein-dependent transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 0.912
MVIS_3292
Amino acid ABC transporter, inner membrane component.
 
 
0.725
MVIS_0352
ABC transporter, ATP-binding protein.
   
 0.647
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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