STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS36485.1Putative spermidine/putrescine transport system substrate-binding protein. (349 aa)    
Predicted Functional Partners:
SIS36478.1
Putative spermidine/putrescine transport system permease protein.
  
  0.996
SIS36483.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
    0.989
SIS36481.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.986
SIS36476.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.975
SIS39466.1
iron(III) transport system permease protein.
  
 
 0.859
SIS36488.1
Transcriptional regulator, GntR family.
 
   
 0.836
SIS36473.1
HAD-superfamily subfamily IB hydrolase, TIGR01490.
 
     0.827
SIT17639.1
High-affinity iron transporter.
  
  
 0.743
SIS37213.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.687
SIS98824.1
Putative spermidine/putrescine transport system permease protein.
    
  0.658
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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