STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS37015.1Peptide/nickel transport system substrate-binding protein. (575 aa)    
Predicted Functional Partners:
SIS92035.1
Peptide/nickel transport system permease protein.
 0.956
SIT05479.1
Peptide/nickel transport system permease protein.
 0.951
SIT19305.1
Peptide/nickel transport system permease protein.
 0.951
SIS92107.1
Peptide/nickel transport system permease protein.
 0.943
SIT19312.1
Peptide/nickel transport system permease protein.
 0.939
SIT05462.1
Peptide/nickel transport system permease protein.
 0.938
SIS37011.1
Two-component system, LuxR family, sensor kinase FixL.
    
 0.813
SIT05446.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.762
SIT19320.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.760
SIS75308.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
    0.699
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.