Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37261.1 | SIS37266.1 | SAMN05421779_101219 | SAMN05421779_101220 | Homoserine dehydrogenase. | Alanine-synthesizing transaminase. | 0.949 |
SIS37261.1 | SIS46375.1 | SAMN05421779_101219 | SAMN05421779_10237 | Homoserine dehydrogenase. | L-threonine synthase. | 0.986 |
SIS37261.1 | SIS68898.1 | SAMN05421779_101219 | SAMN05421779_103116 | Homoserine dehydrogenase. | Aspartate semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.968 |
SIS37261.1 | SIS71168.1 | SAMN05421779_101219 | SAMN05421779_103225 | Homoserine dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.978 |
SIS37261.1 | SIS75813.1 | SAMN05421779_101219 | SAMN05421779_103477 | Homoserine dehydrogenase. | L-threonine ammonia-lyase. | 0.954 |
SIS37261.1 | SIS77362.1 | SAMN05421779_101219 | SAMN05421779_103556 | Homoserine dehydrogenase. | Acetolactate synthase, small subunit. | 0.950 |
SIS37261.1 | SIT00488.1 | SAMN05421779_101219 | SAMN05421779_105293 | Homoserine dehydrogenase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.975 |
SIS37261.1 | asd | SAMN05421779_101219 | SAMN05421779_10390 | Homoserine dehydrogenase. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.972 |
SIS37261.1 | metAA | SAMN05421779_101219 | SAMN05421779_11142 | Homoserine dehydrogenase. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.962 |
SIS37261.1 | thrB | SAMN05421779_101219 | SAMN05421779_103573 | Homoserine dehydrogenase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.936 |
SIS37266.1 | SIS37261.1 | SAMN05421779_101220 | SAMN05421779_101219 | Alanine-synthesizing transaminase. | Homoserine dehydrogenase. | 0.949 |
SIS37266.1 | SIS46375.1 | SAMN05421779_101220 | SAMN05421779_10237 | Alanine-synthesizing transaminase. | L-threonine synthase. | 0.548 |
SIS37266.1 | SIS71168.1 | SAMN05421779_101220 | SAMN05421779_103225 | Alanine-synthesizing transaminase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.585 |
SIS37266.1 | SIS75813.1 | SAMN05421779_101220 | SAMN05421779_103477 | Alanine-synthesizing transaminase. | L-threonine ammonia-lyase. | 0.728 |
SIS37266.1 | SIT00488.1 | SAMN05421779_101220 | SAMN05421779_105293 | Alanine-synthesizing transaminase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.737 |
SIS37266.1 | thrB | SAMN05421779_101220 | SAMN05421779_103573 | Alanine-synthesizing transaminase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.513 |
SIS46375.1 | SIS37261.1 | SAMN05421779_10237 | SAMN05421779_101219 | L-threonine synthase. | Homoserine dehydrogenase. | 0.986 |
SIS46375.1 | SIS37266.1 | SAMN05421779_10237 | SAMN05421779_101220 | L-threonine synthase. | Alanine-synthesizing transaminase. | 0.548 |
SIS46375.1 | SIS68898.1 | SAMN05421779_10237 | SAMN05421779_103116 | L-threonine synthase. | Aspartate semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.640 |
SIS46375.1 | SIS71168.1 | SAMN05421779_10237 | SAMN05421779_103225 | L-threonine synthase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.925 |
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