STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS36536.1Taurine dioxygenase. (290 aa)    
Predicted Functional Partners:
SIS36534.1
Sulfonate transport system permease protein.
 
 0.925
SIS36539.1
Sulfonate transport system substrate-binding protein.
 
 
 0.895
ssuB
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.831
SIT20766.1
Phosphopantetheine attachment site.
 
  
 0.811
SIT07141.1
Amino acid adenylation domain-containing protein.
 
  
 0.791
SIT07166.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
 
  
 0.789
SIT20774.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
 
  
 0.777
SIT10625.1
Hypothetical protein.
  
  
  0.737
SIT16382.1
NitT/TauT family transport system permease protein.
 
 0.729
SIS38120.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite.
     
 0.719
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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