STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS39539.14,5-DOPA dioxygenase extradiol. (265 aa)    
Predicted Functional Partners:
SIS52773.1
Hypothetical protein; Belongs to the pirin family.
 
  
 0.708
SIS91616.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
  
 0.706
SIS42436.1
NAD(P)H-flavin reductase.
  
  
 0.698
SIS39522.1
Predicted dehydrogenase.
    
 0.647
SIT10625.1
Hypothetical protein.
     
 0.640
SIS38182.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
 
    
 0.542
SIS95803.1
Phenylpropionate dioxygenase alpha subunit.
 
  
 0.538
SIS84561.1
Alpha/beta hydrolase fold.
 
  
 0.526
SIS47976.1
2-octaprenyl-6-methoxyphenol hydroxylase.
    
 0.489
SIS73951.1
Amidohydrolase.
    
 0.458
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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