STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS36596.1NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. (461 aa)    
Predicted Functional Partners:
SIS36593.1
Sarcosine oxidase subunit beta.
 0.999
SIS84197.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.987
SIS36598.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 
 0.982
SIS91970.1
Glycine/D-amino acid oxidase.
 
 0.955
SIS51140.1
Glutamate synthase (NADPH) large subunit.
    
 0.923
SIS92192.1
Glycine/D-amino acid oxidase.
 
 
 0.912
SIT15899.1
D-amino-acid dehydrogenase.
 
 0.885
SIT12371.1
D-amino-acid dehydrogenase.
 
 0.874
SIT10625.1
Hypothetical protein.
  
 
 0.865
SIT17355.1
Glycine/D-amino acid oxidase.
 
 
 0.865
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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