STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS36683.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
SIS36687.1
Short-chain dehydrogenase.
 
     0.845
SIS36693.1
SnoaL-like domain-containing protein.
 
     0.840
SIS36702.1
Na+/melibiose symporter.
 
     0.515
SIT05111.1
Hypothetical protein.
  
     0.514
SIT07952.1
LysM domain-containing protein.
  
     0.482
SIT06309.1
Hypothetical protein.
  
     0.462
SIS40921.1
uracil-DNA glycosylase, family 4.
  
     0.418
SIS98706.1
Flagellar export protein FliJ.
  
     0.400
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.