STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS53889.1MJ0042 family finger-like domain-containing protein. (368 aa)    
Predicted Functional Partners:
SIS53945.1
Cell division transport system permease protein.
 
     0.800
SIS39071.1
Flagellar biosynthesis/type III secretory pathway protein FliH.
  
     0.747
SIS71586.1
Hypothetical protein.
  
     0.724
SIS37170.1
Hypothetical protein.
  
     0.715
SIS37213.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.711
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     0.696
SIS96868.1
Class II flagellar assembly regulator.
  
     0.666
SIS96954.1
Flagellin FlgL.
  
     0.655
SIS53972.1
Uncharacterized SAM-binding protein YcdF, DUF218 family.
       0.650
SIS54004.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.632
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.