STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS56471.1Hypothetical protein. (492 aa)    
Predicted Functional Partners:
SIS56259.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.773
bioD
Dethiobiotin synthetase/malonyl-CoA O-methyltransferase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
       0.773
SIS56321.1
malonyl-CoA O-methyltransferase.
       0.773
SIS56351.1
Pimeloyl-[acyl-carrier protein] methyl ester esterase.
       0.773
SIS56377.1
8-amino-7-oxononanoate synthase.
       0.773
SIS56410.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SIS56440.1
Small Multidrug Resistance protein.
       0.773
SIS56503.1
Hypothetical protein.
       0.414
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.