STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS46672.1Glycosyl transferase family 2. (256 aa)    
Predicted Functional Partners:
SIS46694.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.884
SIS47077.1
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.827
SIT20774.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
  
 0.805
SIS46684.1
Sulfotransferase family protein.
     
 0.789
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.784
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
 
 
 0.767
SIS38399.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
 0.757
SIS46715.1
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.690
SIS37007.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
 0.677
SIS37477.1
Glycosyltransferase family 9 (heptosyltransferase).
  
 0.677
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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