STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS68816.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (962 aa)    
Predicted Functional Partners:
SIS39002.1
Response regulator receiver domain-containing protein.
 0.998
SIT11949.1
Hypothetical protein.
0.998
SIS38985.1
PAS domain S-box-containing protein.
 
 0.997
SIS38993.1
Hpt domain-containing protein.
 
 0.997
SIS69490.1
Signal transduction histidine kinase.
 0.997
SIT01259.1
PAS domain S-box-containing protein.
 
 0.997
SIS96657.1
Hypothetical protein.
  
 0.997
SIS96683.1
Two-component system, unclassified family, sensor histidine kinase and response regulator.
 0.997
SIT05199.1
PAS domain S-box-containing protein.
 
0.997
SIT17715.1
PAS domain S-box-containing protein.
 
0.997
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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