Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIS36904.1 | SIS70012.1 | SAMN05421779_101143 | SAMN05421779_103167 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.693 |
| SIS36904.1 | rpoA | SAMN05421779_101143 | SAMN05421779_102703 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.968 |
| SIS36904.1 | rpoB | SAMN05421779_101143 | SAMN05421779_102672 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
| SIS36904.1 | rpoC | SAMN05421779_101143 | SAMN05421779_102673 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.971 |
| SIS36904.1 | rpoZ | SAMN05421779_101143 | SAMN05421779_101646 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.963 |
| SIS37124.1 | SIS70012.1 | SAMN05421779_101195 | SAMN05421779_103167 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.693 |
| SIS37124.1 | rpoA | SAMN05421779_101195 | SAMN05421779_102703 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.967 |
| SIS37124.1 | rpoB | SAMN05421779_101195 | SAMN05421779_102672 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.962 |
| SIS37124.1 | rpoC | SAMN05421779_101195 | SAMN05421779_102673 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.971 |
| SIS37124.1 | rpoZ | SAMN05421779_101195 | SAMN05421779_101646 | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.965 |
| SIS69991.1 | SIS70012.1 | SAMN05421779_103166 | SAMN05421779_103167 | Catechol 2,3-dioxygenase. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.884 |
| SIS69991.1 | SIS70035.1 | SAMN05421779_103166 | SAMN05421779_103168 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.528 |
| SIS69991.1 | purD | SAMN05421779_103166 | SAMN05421779_103169 | Catechol 2,3-dioxygenase. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.565 |
| SIS70012.1 | SIS36904.1 | SAMN05421779_103167 | SAMN05421779_101143 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.693 |
| SIS70012.1 | SIS37124.1 | SAMN05421779_103167 | SAMN05421779_101195 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.693 |
| SIS70012.1 | SIS69991.1 | SAMN05421779_103167 | SAMN05421779_103166 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Catechol 2,3-dioxygenase. | 0.884 |
| SIS70012.1 | SIS70035.1 | SAMN05421779_103167 | SAMN05421779_103168 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Hypothetical protein. | 0.782 |
| SIS70012.1 | SIS73987.1 | SAMN05421779_103167 | SAMN05421779_103367 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.693 |
| SIS70012.1 | purD | SAMN05421779_103167 | SAMN05421779_103169 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.723 |
| SIS70012.1 | rpoA | SAMN05421779_103167 | SAMN05421779_102703 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.716 |
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