STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS67591.1FecR family protein. (350 aa)    
Predicted Functional Partners:
SIS67572.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 0.980
SIT08089.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
 
 0.920
SIS78752.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 0.918
SIT08731.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 0.915
SIT06123.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
 0.914
SIS49180.1
Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
 
 0.906
SIS67628.1
Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.889
SIS96093.1
Iron complex outermembrane recepter protein.
 
 
 0.870
SIT08762.1
Iron complex outermembrane recepter protein.
 
  
 0.809
SIT07086.1
Iron complex outermembrane recepter protein.
 
  
 0.765
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.