STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS78726.1Iron complex outermembrane recepter protein. (824 aa)    
Predicted Functional Partners:
SIT20774.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
  
  
 0.848
SIS78739.1
FecR family protein.
 
  
 0.844
SIT07596.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.829
SIT16650.1
PKHD-type hydroxylase.
 
  
 0.773
SIT08792.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.762
SIS67679.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.748
SIS78752.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.723
SIT08744.1
FecR family protein.
 
  
 0.717
SIS59765.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.699
SIS41756.1
PKHD-type hydroxylase.
 
  
 0.686
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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