STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS85194.1Antirestriction protein ArdC. (805 aa)    
Predicted Functional Partners:
SIS85391.1
Type IV secretion system protein VirB10.
 
     0.921
SIS85289.1
Type IV secretion system protein VirD4.
 
    0.920
SIS85609.1
Hypothetical protein.
 
     0.836
SIS85529.1
Type IV secretion system protein VirB4.
 
     0.831
SIS85344.1
Pilus assembly protein CpaF.
 
     0.810
SIS85178.1
Hypothetical protein.
       0.773
SIS85214.1
Hypothetical protein.
       0.773
SIS85233.1
Single-strand binding protein.
  
    0.683
SIS85411.1
ComB9 competence protein.
       0.672
SIT14015.1
Type IV secretion system protein VirD4.
 
    0.668
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.