STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS87066.1Uncharacterized sulfatase. (322 aa)    
Predicted Functional Partners:
SIS87091.1
Sulfur-oxidizing protein SoxY.
 
     0.953
SIS87125.1
Cytochrome c-550 PedF.
 
   
 0.937
SIS87276.1
PQQ-dependent catabolism-associated CXXCW motif protein.
 
 0.931
SIS87110.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.919
SIT20774.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
   
 0.897
SIT07153.1
Acyl transferase domain-containing protein.
   
 0.847
SIS86949.1
Alcohol dehydrogenase (cytochrome c).
 
   
 0.823
SIT07141.1
Amino acid adenylation domain-containing protein.
   
 0.808
SIT07166.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
   
 0.808
SIT20766.1
Phosphopantetheine attachment site.
   
 0.808
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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