STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS87146.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family. (388 aa)    
Predicted Functional Partners:
SIS87164.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
  
 0.956
SIS87182.1
ABC-2 type transport system ATP-binding protein.
 
 
 0.944
SIS87200.1
ABC-2 type transport system permease protein.
 
   
 0.917
SIT17572.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.883
SIS52226.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.879
SIS87110.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  
 0.877
SIS87125.1
Cytochrome c-550 PedF.
 
   
 0.875
SIS86949.1
Alcohol dehydrogenase (cytochrome c).
 
    0.825
SIS87255.1
NitT/TauT family transport system substrate-binding protein.
 
  
 0.793
SIS87091.1
Sulfur-oxidizing protein SoxY.
 
     0.788
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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