STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS91115.1Outer membrane transport energization protein TonB. (228 aa)    
Predicted Functional Partners:
SIS98983.1
Outer membrane transport energization protein ExbD.
 
 
 0.965
SIS91029.1
Vitamin B12 transporter.
 
 
 
 0.939
SIS98953.1
Biopolymer transport protein ExbB.
 
 
 0.933
SIS98968.1
Biopolymer transport protein ExbD.
 
 
 0.923
SIS76157.1
Outer membrane transport energization protein ExbD.
 
 
 0.898
SIT08041.1
Biopolymer transport protein TolR.
 
 
 0.890
SIS39372.1
Cell division and transport-associated protein TolR.
 
 
 0.889
SIS98922.1
Iron complex outermembrane recepter protein.
 
 
 0.872
SIS68593.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
 
 0.851
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.843
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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