STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS91162.1Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
SIS91177.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.723
SIS48304.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.673
SIS96045.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.557
SIS95827.1
LysR family transcriptional regulator, hca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.548
SIT15822.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.541
SIS50308.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.517
SIS91145.1
Nicotinamidase-related amidase.
     
 0.492
SIT05910.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.485
SIS91129.1
Hypothetical protein.
       0.475
SIS39267.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
   
 0.469
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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