STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS92264.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
SIS92289.1
Ribosomal protein S18 acetylase RimI.
 
     0.831
SIS92279.1
Glyoxylate/hydroxypyruvate reductase A.
 
     0.805
SIS92174.1
2-haloacid dehalogenase.
 
     0.745
SIS91970.1
Glycine/D-amino acid oxidase.
 
    0.719
SIS36650.1
Hypothetical protein.
  
     0.716
SIS92160.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.713
SIS92251.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
     0.698
SIS92141.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.675
SIS92123.1
Peptide/nickel transport system substrate-binding protein.
  
     0.668
SIS92192.1
Glycine/D-amino acid oxidase.
 
    0.659
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.