STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS98792.1Putative spermidine/putrescine transport system substrate-binding protein. (349 aa)    
Predicted Functional Partners:
potA-3
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.996
SIS98807.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.986
SIS98824.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.980
SIT05836.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.919
SIS36600.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.886
SIS36478.1
Putative spermidine/putrescine transport system permease protein.
  
 
 0.819
SIT05850.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.813
potA-4
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.805
SIS36603.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.779
SIS41708.1
Spermidine/putrescine transport system permease protein.
  
 
 0.762
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.