STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT00552.1Phospholipid transport system substrate-binding protein. (215 aa)    
Predicted Functional Partners:
SIS70432.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.986
SIS70455.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.985
SIT00535.1
Phospholipid-binding lipoprotein MlaA.
 
 
 
 0.968
SIS47387.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.959
SIS73285.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 
 0.949
SIT18286.1
Anti-anti-sigma factor.
  
 
 0.887
SIS73260.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 
 0.885
SIS47399.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 
 0.883
SIS47408.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 
 0.794
SIS54843.1
Outer membrane protein (porin).
  
 
 
 0.689
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.