STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT06888.1Hydrogenase small subunit. (367 aa)    
Predicted Functional Partners:
SIS75768.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 0.999
SIT06906.1
Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 0.999
SIT06923.1
Ni/Fe-hydrogenase 1 B-type cytochrome subunit.
 
 
 0.998
SIT06989.1
Hydrogenase-1 operon protein HyaF.
 
 
 0.976
SIT07290.1
Nickel-dependent hydrogenase.
 
  
 0.962
SIT07276.1
[NiFe] hydrogenase assembly chaperone, HybE family.
 
 
 0.954
SIT06938.1
Hydrogenase 1 maturation peptidase HyaD. Aspartic peptidase. MEROPS family A31.
 
  
 0.945
SIS75308.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.929
SIS75784.1
Ni,Fe-hydrogenase I small subunit.
  
  
 
0.906
SIT06955.1
Hydrogenase expression/formation protein HypC.
 
 
 0.905
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.