STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT08500.1HlyD family secretion protein/membrane fusion protein, adhesin transport system. (464 aa)    
Predicted Functional Partners:
SIT08485.1
ATP-binding cassette, subfamily B.
 0.993
SIS42314.1
ATP-binding cassette, subfamily C, LapB.
 0.972
SIS79053.1
ATP-binding cassette, subfamily C/ATP-binding cassette, subfamily C, LapB.
 0.972
SIS79036.1
ATP-binding cassette, subfamily C, LapB.
 0.971
SIT12403.1
ATP-binding cassette, subfamily B, HlyB/CyaB.
 0.965
SIS38699.1
Outer membrane protein, adhesin transport system.
 
 0.948
SIS42041.1
Outer membrane protein.
 
 0.922
macB
Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.917
SIT08435.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.916
SIT20640.1
Outer membrane protein TolC.
 
 0.876
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.