STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT05987.1Trypsin-like peptidase domain-containing protein. (376 aa)    
Predicted Functional Partners:
SIT14371.1
ATPase family associated with various cellular activities (AAA).
   
 0.968
SIS41849.1
Outer membrane protein OmpA.
  
 
 0.907
SIS37140.1
JAB domain-containing protein.
   
 0.865
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.844
SIT12067.1
Hypothetical chaperone protein.
  
 
 0.844
SIS51218.1
ATP-binding cassette, subfamily B/ATP-binding cassette, subfamily B, MsbA.
    
 0.817
msbA
ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
 0.817
SIT07208.1
ATP-binding cassette, subfamily B.
    
 0.817
SIT07221.1
ATP-binding cassette, subfamily B.
    
 0.817
SIT20300.1
ATP-binding cassette, subfamily B.
    
 0.817
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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