STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT14389.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
SIT14406.1
Hypothetical protein.
   
   0.980
SIT14371.1
ATPase family associated with various cellular activities (AAA).
       0.799
SIT14419.1
Nucleotidyltransferase domain-containing protein.
       0.799
SIT14432.1
Hypothetical protein.
       0.700
SIT14353.1
Hypothetical protein.
       0.569
SIT14447.1
Putative transposase.
       0.441
SIT14316.1
Protein of unknown function.
       0.412
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.