STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT16043.1Hypothetical protein. (696 aa)    
Predicted Functional Partners:
SIT16058.1
N-terminal double-transmembrane domain-containing protein.
 
     0.959
SIT16071.1
Protein of unknown function DUF58.
 
     0.959
SIT16084.1
MoxR-like ATPase.
 
     0.942
SIT16100.1
Hypothetical protein.
 
     0.816
SIS46230.1
TIGR02302 family protein.
  
     0.775
SIS47187.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.691
SIS38409.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.674
SIS50785.1
Helix-turn-helix.
  
     0.668
SIT16112.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
       0.667
SIT16136.1
poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.644
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.