STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT16058.1N-terminal double-transmembrane domain-containing protein. (931 aa)    
Predicted Functional Partners:
SIT16071.1
Protein of unknown function DUF58.
 
    0.964
SIT16043.1
Hypothetical protein.
 
     0.959
SIT16084.1
MoxR-like ATPase.
 
     0.943
SIS96067.1
Serine/threonine-protein kinase HipA.
    
 0.847
SIT18701.1
Hypothetical protein.
    
 0.847
SIS47976.1
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 
 0.834
SIT16100.1
Hypothetical protein.
 
     0.833
SIS46230.1
TIGR02302 family protein.
  
    0.775
SIS41197.1
Phytoene synthase.
 
 
 0.748
SIS41186.1
Squalene synthase HpnC.
 
 
 0.728
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.