STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT16485.1Putative flavoprotein involved in K+ transport. (408 aa)    
Predicted Functional Partners:
SIT16500.1
Dimethylamine/trimethylamine dehydrogenase.
 
  
 0.970
SIT16431.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
     0.932
SIT16358.1
Dimethylamine/trimethylamine dehydrogenase.
 
  
 0.926
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.905
SIS60646.1
EF hand.
    
 
 0.901
SIS69746.1
EF hand.
    
 
 0.901
SIT16457.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     0.877
SIT16444.1
Uncharacterized conserved protein, Ntn-hydrolase superfamily.
 
     0.801
SIT20774.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
  
 0.793
SIS37385.1
Acyl transferase domain-containing protein.
  
 
 0.751
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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