STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT16842.1Hypothetical protein. (458 aa)    
Predicted Functional Partners:
SIT16833.1
Hypothetical protein.
  
 0.982
SIT16822.1
Hypothetical protein.
  
 0.966
SIT16790.1
Von Willebrand factor type A domain-containing protein.
 
    0.911
SIT16763.1
Putative ABC transport system permease protein.
 
    0.910
SIT16752.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
    0.908
SIT16738.1
Glycine zipper.
 
     0.901
SIT16715.1
Trypsin-like peptidase domain-containing protein.
 
    0.853
SIT16776.1
Putative ABC transport system ATP-binding protein.
 
    0.847
SIT16853.1
Von Willebrand factor type A domain-containing protein.
 
   
0.720
SIT16810.1
Hypothetical protein.
     
 0.689
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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