STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT17412.1Major Facilitator Superfamily protein. (573 aa)    
Predicted Functional Partners:
SIT17440.1
Formate dehydrogenase alpha subunit.
  
 0.876
SIT17422.1
Formate dehydrogenase subunit delta.
 
     0.806
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.753
SIT20774.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
  
 
 0.664
SIT17449.1
Formate dehydrogenase beta subunit.
 
     0.629
SIT17461.1
Formate dehydrogenase gamma subunit.
 
     0.616
SIT17473.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.501
SIT07141.1
Amino acid adenylation domain-containing protein.
    
 0.484
SIT07166.1
Yersiniabactin nonribosomal peptide/polyketide synthase.
    
 0.484
SIT20766.1
Phosphopantetheine attachment site.
    
 0.484
Your Current Organism:
Insolitispirillum peregrinum
NCBI taxonomy Id: 80876
Other names: ATCC 15387, Aquaspirillum peregrinum, CCUG 13795, I. peregrinum, IFO 14922, JCM 21450, LMG 4340, LMG:4340, NBRC 14922, Spirillum peregrinum
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