STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJA11883.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)    
Predicted Functional Partners:
KJA12039.1
Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.881
KJA11884.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.861
KJA11885.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
    0.849
KJA11888.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.839
KJA11886.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.811
KJA11887.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.784
KJA11123.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.663
KJA12319.1
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.638
KJA10307.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.568
KJA12384.1
Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.491
Your Current Organism:
Acidovorax temperans
NCBI taxonomy Id: 80878
Other names: A. temperans, ATCC 49665, Acidivorax temperans, CCUG 11779, CCUG 29362, CFBP 3610, CIP 103457, DSM 7270, LMG 7169, LMG:7169
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.