STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJA11820.1Allantoate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)    
Predicted Functional Partners:
KJA10207.1
Allantoate amidohydrolase; Bifunctional enzyme; OHCU decarboxylase catalyzes 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline to allantoin and allantoate amidohydrolase converts allantoate to (S)-ureidoglycolate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.870
KJA11821.1
Diaminopropionate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.775
argA
Amino acid acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.717
KJA11822.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.624
KJA10206.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.619
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.547
KJA11819.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
KJA09974.1
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.527
KJA10267.1
Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.519
KJA10201.1
5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.513
Your Current Organism:
Acidovorax temperans
NCBI taxonomy Id: 80878
Other names: A. temperans, ATCC 49665, Acidivorax temperans, CCUG 11779, CCUG 29362, CFBP 3610, CIP 103457, DSM 7270, LMG 7169, LMG:7169
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