STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoga14-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family. (302 aa)    
Predicted Functional Partners:
gclc
Glutamate-cysteine ligase, catalytic subunit.
   
 0.677
enosf1
Enolase superfamily member 1.
      
 0.483
LOC101175148
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
  
 0.471
LOC101163636
Glyoxylate reductase/hydroxypyruvate reductase b; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.465
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
  
 
 0.453
LOC101168130
Zgc:136493; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.448
LOC101154959
Glyoxylate reductase/hydroxypyruvate reductase a; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.448
LOC101169325
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.448
mmadhc
Zgc:92335.
    
 0.445
H2LEE2_ORYLA
Aldo_ket_red domain-containing protein.
  
 0.433
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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