STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159565Protein kinase domain-containing protein. (872 aa)    
Predicted Functional Partners:
cdc25b
Rhodanese domain-containing protein.
    
 
 0.761
wee1
Wee1-like protein kinase.
   
 
0.564
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
   
 
0.564
LOC101156733
Wee1-like protein kinase.
   
 
0.564
LOC101172303
Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.562
nap1l1
Nucleosome assembly protein 1-like 1; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.559
cdc23
CDC23 (cell division cycle 23, yeast, homolog).
    
   0.546
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
   0.545
prmt5
Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 
 0.518
p2rx4
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
    
 
 0.515
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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