STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101171807ATPase copper transporting beta. (1308 aa)    
Predicted Functional Partners:
ccs
Copper chaperone for superoxide dismutase.
  
 0.963
atox1
Antioxidant 1 copper chaperone.
    
 0.953
LOC101169240
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.690
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.690
pdzd11
PDZ domain containing 11.
    
 0.686
ccdc22
Coiled-coil domain containing 22.
      
 0.597
LOC101174928
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
  
 
 0.502
LOC101171566
Ceruloplasmin; Belongs to the multicopper oxidase family.
  
 
 0.502
edil3
EGF-like repeats and discoidin I-like domains 3a.
  
 
 0.502
LOC101166425
Coagulation factor V; Belongs to the multicopper oxidase family.
  
 
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.