Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pjvkPejvakin. (329 aa)    
Predicted Functional Partners:
LOC101174762
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.774
NFE2L1
Nuclear factor, erythroid 2 like 1.
      
 0.690
ITPRID2
ITPR interacting domain containing 2.
      
 0.603
triobp
TRIO and F-actin binding protein b.
     
 0.560
casp2
Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 0.547
LOC101170330
Xin actin binding repeat containing 2a.
     
 0.537
LOC101160509
Xin actin binding repeat containing 1.
     
 0.537
xirp2
Xin actin binding repeat containing 2b.
     
 0.537
H2LKK7_ORYLA
Transmembrane protein 126A.
      
 0.535
H2MBY2_ORYLA
Uncharacterized protein.
    
  0.530
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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