STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169206TAO kinase 2a. (1139 aa)    
Predicted Functional Partners:
LOC101163933
Mitogen-activated protein kinase kinase 6.
    
0.914
LOC101170843
Protein kinase domain-containing protein.
    
0.914
sez6l2
Seizure related 6 homolog (mouse)-like 2.
      
 0.625
LOC101174920
Potassium channel tetramerization domain containing 13.
      
 0.609
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
  
 0.596
LOC101170433
Coronin; Belongs to the WD repeat coronin family.
      
 0.590
LOC101167710
Uncharacterized protein.
      
 0.590
ENSORLP00000031025
Proline-rich transmembrane protein 2.
      
 0.590
IGFBP3
Insulin like growth factor binding protein 3.
    
 0.519
tlcd3b
TLC domain containing 3Bb.
      
 0.518
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.