STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157226Lysine (K)-specific methyltransferase 2Ba. (2767 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.916
rbbp5
Retinoblastoma binding protein 5.
    
 0.906
wdr5
WD repeat domain 5.
   
 0.803
men1
Multiple endocrine neoplasia I.
    
 
 0.776
adcy9
CREB binding protein b.
   
 0.772
LOC101163392
CREB binding protein a.
   
 0.772
LOC101160197
E1A binding protein p300 a.
   
 0.748
LOC101168870
E1A binding protein p300 b.
   
 0.748
ppie
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
    
 
 0.744
H2N0U4_ORYLA
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.672
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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