STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
embEmbigin. (335 aa)    
Predicted Functional Partners:
slc16a7
Solute carrier family 16 member 7.
   
 0.778
slc16a1
Solute carrier family 16 member 1a.
   
 0.775
LOC101170020
MFS domain-containing protein.
   
 0.775
slc16a3
Solute carrier family 16 member 3.
    
 0.717
slc16a4
Solute carrier family 16 member 4.
   
 0.606
adi1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Also down-regulates cell migration mediated by MMP14. Belongs to the acireductone dioxygenase (ARD) family.
      
 0.589
SLC16A6
Solute carrier family 16 member 6b.
   
 0.563
LOC101155804
Solute carrier family 16 member 6a.
   
 0.551
slc16a9
Solute carrier family 16 member 9a.
   
 0.549
LOC101160486
Zgc:114041.
   
 0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.