LOC111948052 protein (Oryzias latipes) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC111948052

Uncharacterized protein. (227 aa)

Predicted Functional Partners:

LOC101163660

0.759

LOC100049528

0.753

LOC101157868

0.686

ncbp2

0.685

tra2a

0.673

tra2b

0.671

fau

0.629

ENSORLP00000034025

0.629

hnrnpk

0.620

LOC101167466

0.620

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000034025	LOC100049528	ENSORLP00000034025	ENSORLP00000026065	RRM domain-containing protein.	Serine and arginine rich splicing factor 2a.	0.824
ENSORLP00000034025	LOC101157868	ENSORLP00000034025	ENSORLP00000027595	RRM domain-containing protein.	Transformer 2 alpha homolog.	0.774
ENSORLP00000034025	LOC101163660	ENSORLP00000034025	ENSORLP00000001513	RRM domain-containing protein.	RRM domain-containing protein.	0.832
ENSORLP00000034025	LOC101167466	ENSORLP00000034025	ENSORLP00000029054	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K, like.	0.562
ENSORLP00000034025	LOC111948052	ENSORLP00000034025	ENSORLP00000000484	RRM domain-containing protein.	Uncharacterized protein.	0.629
ENSORLP00000034025	hnrnpk	ENSORLP00000034025	ENSORLP00000006506	RRM domain-containing protein.	Heterogeneous nuclear ribonucleoprotein K.	0.562
ENSORLP00000034025	ncbp2	ENSORLP00000034025	ENSORLP00000014087	RRM domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.826
ENSORLP00000034025	tra2a	ENSORLP00000034025	ENSORLP00000017283	RRM domain-containing protein.	RRM domain-containing protein.	0.771
ENSORLP00000034025	tra2b	ENSORLP00000034025	ENSORLP00000045431	RRM domain-containing protein.	RRM domain-containing protein.	0.769
LOC100049528	ENSORLP00000034025	ENSORLP00000026065	ENSORLP00000034025	Serine and arginine rich splicing factor 2a.	RRM domain-containing protein.	0.824
LOC100049528	LOC101157868	ENSORLP00000026065	ENSORLP00000027595	Serine and arginine rich splicing factor 2a.	Transformer 2 alpha homolog.	0.796
LOC100049528	LOC101167466	ENSORLP00000026065	ENSORLP00000029054	Serine and arginine rich splicing factor 2a.	Heterogeneous nuclear ribonucleoprotein K, like.	0.650
LOC100049528	LOC111948052	ENSORLP00000026065	ENSORLP00000000484	Serine and arginine rich splicing factor 2a.	Uncharacterized protein.	0.753
LOC100049528	hnrnpk	ENSORLP00000026065	ENSORLP00000006506	Serine and arginine rich splicing factor 2a.	Heterogeneous nuclear ribonucleoprotein K.	0.650
LOC100049528	ncbp2	ENSORLP00000026065	ENSORLP00000014087	Serine and arginine rich splicing factor 2a.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.714
LOC100049528	tra2a	ENSORLP00000026065	ENSORLP00000017283	Serine and arginine rich splicing factor 2a.	RRM domain-containing protein.	0.792
LOC100049528	tra2b	ENSORLP00000026065	ENSORLP00000045431	Serine and arginine rich splicing factor 2a.	RRM domain-containing protein.	0.792
LOC101157868	ENSORLP00000034025	ENSORLP00000027595	ENSORLP00000034025	Transformer 2 alpha homolog.	RRM domain-containing protein.	0.774
LOC101157868	LOC100049528	ENSORLP00000027595	ENSORLP00000026065	Transformer 2 alpha homolog.	Serine and arginine rich splicing factor 2a.	0.796
LOC101157868	LOC101163660	ENSORLP00000027595	ENSORLP00000001513	Transformer 2 alpha homolog.	RRM domain-containing protein.	0.795