STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157551Ankyrin repeat domain 34Ba. (510 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.496
LOC101170477
Uncharacterized protein.
  
     0.474
ENSORLP00000028016
ANK_REP_REGION domain-containing protein.
  
 
  0.474
LOC101157753
Ankyrin repeat and SOCS box containing 2b.
  
     0.472
LOC101172854
Ankyrin repeat and SOCS box containing 11.
  
     0.467
LOC101166936
Uncharacterized protein.
  
     0.467
rfxank
Regulatory factor X-associated ankyrin-containing protein.
  
   
 0.467
mtpn
ANK_REP_REGION domain-containing protein.
  
 
   0.459
H2M614_ORYLA
ANK_REP_REGION domain-containing protein.
  
     0.458
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.458
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.