Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDYL2 | LOC101172193 | ENSORLP00000012082 | ENSORLP00000009032 | Chromodomain Y like 2. | Peroxisomal biogenesis factor 5-like b. | 0.575 |
CDYL2 | LOC101172485 | ENSORLP00000012082 | ENSORLP00000041161 | Chromodomain Y like 2. | Sterol carrier protein 2b. | 0.855 |
CDYL2 | RPP14 | ENSORLP00000012082 | ENSORLP00000016622 | Chromodomain Y like 2. | Ribonuclease P/MRP subunit p14. | 0.705 |
CDYL2 | cdyl | ENSORLP00000012082 | ENSORLP00000009659 | Chromodomain Y like 2. | Chromodomain protein, Y-like. | 0.630 |
CDYL2 | ech1 | ENSORLP00000012082 | ENSORLP00000000835 | Chromodomain Y like 2. | Enoyl CoA hydratase 1, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.755 |
CDYL2 | eci2 | ENSORLP00000012082 | ENSORLP00000004559 | Chromodomain Y like 2. | Enoyl-CoA delta isomerase 2. | 0.511 |
CDYL2 | hsd17b4 | ENSORLP00000012082 | ENSORLP00000004428 | Chromodomain Y like 2. | Hydroxysteroid (17-beta) dehydrogenase 4. | 0.510 |
CDYL2 | hsdl2 | ENSORLP00000012082 | ENSORLP00000028970 | Chromodomain Y like 2. | Hydroxysteroid dehydrogenase like 2. | 0.825 |
CDYL2 | pex5 | ENSORLP00000012082 | ENSORLP00000026358 | Chromodomain Y like 2. | Peroxisomal biogenesis factor 5. | 0.575 |
CDYL2 | scp2 | ENSORLP00000012082 | ENSORLP00000013108 | Chromodomain Y like 2. | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.855 |
LOC101172193 | CDYL2 | ENSORLP00000009032 | ENSORLP00000012082 | Peroxisomal biogenesis factor 5-like b. | Chromodomain Y like 2. | 0.575 |
LOC101172193 | LOC101172485 | ENSORLP00000009032 | ENSORLP00000041161 | Peroxisomal biogenesis factor 5-like b. | Sterol carrier protein 2b. | 0.996 |
LOC101172193 | RPP14 | ENSORLP00000009032 | ENSORLP00000016622 | Peroxisomal biogenesis factor 5-like b. | Ribonuclease P/MRP subunit p14. | 0.771 |
LOC101172193 | cdyl | ENSORLP00000009032 | ENSORLP00000009659 | Peroxisomal biogenesis factor 5-like b. | Chromodomain protein, Y-like. | 0.575 |
LOC101172193 | ech1 | ENSORLP00000009032 | ENSORLP00000000835 | Peroxisomal biogenesis factor 5-like b. | Enoyl CoA hydratase 1, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.739 |
LOC101172193 | eci2 | ENSORLP00000009032 | ENSORLP00000004559 | Peroxisomal biogenesis factor 5-like b. | Enoyl-CoA delta isomerase 2. | 0.973 |
LOC101172193 | hsd17b4 | ENSORLP00000009032 | ENSORLP00000004428 | Peroxisomal biogenesis factor 5-like b. | Hydroxysteroid (17-beta) dehydrogenase 4. | 0.695 |
LOC101172193 | hsdl2 | ENSORLP00000009032 | ENSORLP00000028970 | Peroxisomal biogenesis factor 5-like b. | Hydroxysteroid dehydrogenase like 2. | 0.966 |
LOC101172193 | scp2 | ENSORLP00000009032 | ENSORLP00000013108 | Peroxisomal biogenesis factor 5-like b. | Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.996 |
LOC101172485 | CDYL2 | ENSORLP00000041161 | ENSORLP00000012082 | Sterol carrier protein 2b. | Chromodomain Y like 2. | 0.855 |
page 1 of 6