STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158782Cyclin and CBS domain divalent metal cation transport mediator 4a. (746 aa)    
Predicted Functional Partners:
gmps
Guanine monophosphate synthase.
  
 
 0.661
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.562
LOC101157004
Protein tyrosine phosphatase 4A3b.
    
 
 0.534
ybey
YbeY metalloendoribonuclease.
  
  
 0.483
ptp4a1
Protein tyrosine phosphatase 4A1.
    
 
 0.451
LOC101164411
Protein tyrosine phosphatase 4A2b.
    
 
 0.451
NT5E
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
    
 0.412
NT5E-2
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.412
LOC101163535
Protein tyrosine phosphatase 4A2a.
    
 
 0.406
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.