pdcd2l protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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co-expression

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[Homology]

Score

pdcd2l

Programmed cell death 2-like. (344 aa)

Predicted Functional Partners:

prmt3

0.980

rps2

0.807

znf277

0.775

LOC101164846

0.713

LOC101172303

0.678

bysl

0.663

pabpn1

0.646

wdpcp

0.582

perp

0.574

ENSORLP00000029432

0.556

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000029432	LOC101172303	ENSORLP00000029432	ENSORLP00000023671	Mitochondrial ribosomal protein S5.	Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.	0.437
ENSORLP00000029432	bysl	ENSORLP00000029432	ENSORLP00000000305	Mitochondrial ribosomal protein S5.	Bystin-like.	0.818
ENSORLP00000029432	pdcd2l	ENSORLP00000029432	ENSORLP00000001001	Mitochondrial ribosomal protein S5.	Programmed cell death 2-like.	0.556
ENSORLP00000029432	prmt3	ENSORLP00000029432	ENSORLP00000001018	Mitochondrial ribosomal protein S5.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.418
ENSORLP00000029432	rps2	ENSORLP00000029432	ENSORLP00000011617	Mitochondrial ribosomal protein S5.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.405
LOC101164846	pdcd2l	ENSORLP00000010507	ENSORLP00000001001	Zgc:92429.	Programmed cell death 2-like.	0.713
LOC101172303	ENSORLP00000029432	ENSORLP00000023671	ENSORLP00000029432	Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.	Mitochondrial ribosomal protein S5.	0.437
LOC101172303	pdcd2l	ENSORLP00000023671	ENSORLP00000001001	Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.	Programmed cell death 2-like.	0.678
LOC101172303	rps2	ENSORLP00000023671	ENSORLP00000011617	Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.607
bysl	ENSORLP00000029432	ENSORLP00000000305	ENSORLP00000029432	Bystin-like.	Mitochondrial ribosomal protein S5.	0.818
bysl	pdcd2l	ENSORLP00000000305	ENSORLP00000001001	Bystin-like.	Programmed cell death 2-like.	0.663
bysl	prmt3	ENSORLP00000000305	ENSORLP00000001018	Bystin-like.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.598
bysl	rps2	ENSORLP00000000305	ENSORLP00000011617	Bystin-like.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.973
pabpn1	pdcd2l	ENSORLP00000039508	ENSORLP00000001001	Poly(A) binding protein, nuclear 1.	Programmed cell death 2-like.	0.646
pabpn1	prmt3	ENSORLP00000039508	ENSORLP00000001018	Poly(A) binding protein, nuclear 1.	Protein arginine methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.	0.464
pabpn1	rps2	ENSORLP00000039508	ENSORLP00000011617	Poly(A) binding protein, nuclear 1.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.640
pdcd2l	ENSORLP00000029432	ENSORLP00000001001	ENSORLP00000029432	Programmed cell death 2-like.	Mitochondrial ribosomal protein S5.	0.556
pdcd2l	LOC101164846	ENSORLP00000001001	ENSORLP00000010507	Programmed cell death 2-like.	Zgc:92429.	0.713
pdcd2l	LOC101172303	ENSORLP00000001001	ENSORLP00000023671	Programmed cell death 2-like.	Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family.	0.678
pdcd2l	bysl	ENSORLP00000001001	ENSORLP00000000305	Programmed cell death 2-like.	Bystin-like.	0.663